Determining accurate molecular dimensions in water, from measured translational self-diffusion coefficients (Dt), is extremely important in biochemistry, supramolecular chemistry, organometallic chemistry and beyond, but it still represents a big challenge especially for small and medium-sized molecules. Indeed, current semiempirical adaptations of the Stokes-Einstein equation, which allow accurate determination of molecular size of solutes in organic solvents, proved inadequate for aqueous systems. To overcome such a major limitation, herein, we introduce a novel approach that unlocks the quantitative interpretation of Dt in water. By analyzing ~70 diverse molecules with volumes ranging from 101 Å3 to 103 Å3, and selecting the partial molar radius (rM) as a reliable proxy for the hydrodynamic radius (rH), we derived a semiempirical equation that enables accurate determination of hydrodynamic volume (VH) of solutes in aqueous solutions, effectively accounting for the distinctive hydrogen-bonding properties of water. This approach fills a crucial gap, enhancing precise molecular characterization of polar and non-polar solutes in water.

Accurate Determination of Molecular Sizes of a Solute in Water From its Translational Self‐Diffusion Coefficient

Zaccaria, Francesco
;
Macchioni, Alceo;Zuccaccia, Cristiano
2025

Abstract

Determining accurate molecular dimensions in water, from measured translational self-diffusion coefficients (Dt), is extremely important in biochemistry, supramolecular chemistry, organometallic chemistry and beyond, but it still represents a big challenge especially for small and medium-sized molecules. Indeed, current semiempirical adaptations of the Stokes-Einstein equation, which allow accurate determination of molecular size of solutes in organic solvents, proved inadequate for aqueous systems. To overcome such a major limitation, herein, we introduce a novel approach that unlocks the quantitative interpretation of Dt in water. By analyzing ~70 diverse molecules with volumes ranging from 101 Å3 to 103 Å3, and selecting the partial molar radius (rM) as a reliable proxy for the hydrodynamic radius (rH), we derived a semiempirical equation that enables accurate determination of hydrodynamic volume (VH) of solutes in aqueous solutions, effectively accounting for the distinctive hydrogen-bonding properties of water. This approach fills a crucial gap, enhancing precise molecular characterization of polar and non-polar solutes in water.
2025
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11391/1611354
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